Online Databases: Difference between revisions
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<h2>Motifs</h2> | <h2>Motifs</h2> | ||
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<li>[http://cossmos.slu.edu/ RNA CoSSMos (RNA Characterization of Secondary Structure Motifs)] allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structure motifs such as mismatches, (a)symmetric internal loops, hairpin loops, and bulge loops.</li> | |||
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<li>[http://scor.berkeley.edu/scor.html SCOR (Structural Classification of RNA)]</li> | <li>[http://scor.berkeley.edu/scor.html SCOR (Structural Classification of RNA)]</li> | ||
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<h2>Basic Strucural Elements</h2> | <h2>Basic Strucural Elements</h2> | ||
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Revision as of 20:26, 25 May 2013
Secondary Structure
see List of Secondary Structure Databases
Tertiary Structure
- RCSB PDB (Protein Data Bank @ Research Collaboratory for Structural Bioinformatics)
- NDB (Nucleic acid DataBase)
Motifs
- RNA CoSSMos (RNA Characterization of Secondary Structure Motifs) allows the systematic searching of all catalogued three-dimensional nucleic acid PDB structures that contain secondary structure motifs such as mismatches, (a)symmetric internal loops, hairpin loops, and bulge loops.
