Eterna Dictionary: Difference between revisions
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<ul> | <ul> | ||
<li class="toclevel-1"><a href="#M"><span class="toctext">M</span></a></li> | <li class="toclevel-1"><a href="#M"><span class="toctext">M</span></a></li> | ||
<li class="toclevel-1"><a href="#N"><span class="toctext">N</span></a></li> | <li class="toclevel-1"><a href="#N"><span class="toctext">N</span></a><a href="#P"><span class="toctext"> </span></a></li> | ||
<li class="toclevel-1"><a href="#O"><span class="toctext">O</span></a></li> | |||
<li class="toclevel-1"><a href="#P"><span class="toctext">P</span></a></li> | <li class="toclevel-1"><a href="#P"><span class="toctext">P</span></a></li> | ||
</ul> | </ul> | ||
</td> | </td> | ||
<td> | <td> | ||
<ul> | <ul> | ||
<li class="toclevel-1"><a href="#Q"><span class="toctext">Q</span></a></li> | |||
<li class="toclevel-1"><a href="#R"><span class="toctext">R</span></a></li> | <li class="toclevel-1"><a href="#R"><span class="toctext">R</span></a></li> | ||
<li class="toclevel-1"><a href="#S"><span class="toctext">S</span></a></li> | <li class="toclevel-1"><a href="#S"><span class="toctext">S</span></a></li> | ||
<li class="toclevel-1"><a href="#T"><span class="toctext">T</span></a></li> | <li class="toclevel-1"><a href="#T"><span class="toctext">T</span></a></li> | ||
</ul> | </ul> | ||
</td> | </td> | ||
<td> | <td> | ||
<ul> | <ul> | ||
<li class="toclevel-1"><a href="#U"><span class="toctext">U</span></a></li> | |||
<li class="toclevel-1"><a href="#V"><span class="toctext">V</span></a></li> | <li class="toclevel-1"><a href="#V"><span class="toctext">V</span></a></li> | ||
<li class="toclevel-1"><a href="#W"><span class="toctext">W</span></a></li> | <li class="toclevel-1"><a href="#W"><span class="toctext">W</span></a></li> | ||
<li class="toclevel-1"><a href="#X"><span class="toctext">X</span></a></li> | <li class="toclevel-1"><a href="#X"><span class="toctext">X</span></a></li> | ||
</ul> | </ul> | ||
</td> | </td> | ||
<td> | <td> | ||
<ul> | <ul> | ||
<li class="toclevel-1"><a href="#Y"><span class="toctext">Y</span></a></li> | |||
<li class="toclevel-1"><a href="#Z"><span class="toctext">Z</span></a></li> | <li class="toclevel-1"><a href="#Z"><span class="toctext">Z</span></a></li> | ||
<li class="toclevel-1"><a href="#0-9"><span class="toctext">0-9</span></a></li> | |||
</ul> | </ul> | ||
</td> | </td> | ||
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<li>[[Adjacent pairs]]</li> | <li>[[Adjacent pairs]]</li> | ||
<li>[[Algorithm Wars]]</li> | <li>[[Algorithm Wars]]</li> | ||
<li>[[Aligned Pair]]</li> | <li>[[Aligned Pair]]</li> | ||
<li>[[Alternative Structure]]</li> | <li>[[Alternative Structure]]</li> | ||
<li>[[Amino acid]]</li> | <li>[[Amino acid]]</li> | ||
<li>[[Antiparallel DNA]]</li> | |||
<li>[[Aptamer]]</li> | <li>[[Aptamer]]</li> | ||
<li>[[Arm]]</li> | <li>[[Arm]]</li> | ||
<li>[[Asymmetric multiloop]]</li> | <li>[[Asymmetric multiloop]]</li> | ||
<li>[[Atom]]</li> | |||
<li>[[ATP]]</li> | <li>[[ATP]]</li> | ||
<li>[[AU Pair]]</li> | <li>[[AU Pair]]</li> | ||
Line 88: | Line 91: | ||
<ul> | <ul> | ||
<li>[[Backbone]]</li> | <li>[[Backbone]]</li> | ||
<li>[[Bacteria]]</li> | |||
<li>[[Barcode]]</li> | <li>[[Barcode]]</li> | ||
<li>[[Base]]</li> | <li>[[Base]]</li> | ||
Line 108: | Line 112: | ||
<li>[[Canonical bond]]</li> | <li>[[Canonical bond]]</li> | ||
<li>[[Capillary Electrophoresis]]</li> | <li>[[Capillary Electrophoresis]]</li> | ||
<li>[[Carbon]]</li> | |||
<li>[[Catalyst Points]]</li> | <li>[[Catalyst Points]]</li> | ||
<li>[[Chemical Reagent]]</li> | |||
<li>[[Christmas Tree]]</li> | <li>[[Christmas Tree]]</li> | ||
<li>[[Closing Pair]]</li> | <li>[[Closing Pair]]</li> | ||
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<li>[[Complementarity]]</li> | <li>[[Complementarity]]</li> | ||
<li>[[Complementary DNA]] ([[cDNA]])</li> | <li>[[Complementary DNA]] ([[cDNA]])</li> | ||
<li>[[Concentration]]</li> | |||
<li>[[Constraints]]</li> | <li>[[Constraints]]</li> | ||
<li>[[Cub Scout]]</li> | <li>[[Cub Scout]]</li> | ||
Line 126: | Line 133: | ||
<li>[[Deoxyribose]]</li> | <li>[[Deoxyribose]]</li> | ||
<li>[[Dev Chat]]</li> | <li>[[Dev Chat]]</li> | ||
<li>[[Diazine]]</li> | |||
<li>[[Dictionary Chat Bot]]</li> | <li>[[Dictionary Chat Bot]]</li> | ||
<li>[[Dinucleotide]]</li> | <li>[[Dinucleotide]]</li> | ||
Line 139: | Line 147: | ||
<h2>E</h2> | <h2>E</h2> | ||
<ul> | <ul> | ||
<li>[[Electron]]</li> | |||
<li>[[Elements]]</li> | <li>[[Elements]]</li> | ||
<li>[[ | <li>[[User:Eli_Fisker/EEE|Eli's Encyclopædia EteRNA]]</li> | ||
<li>[[User:Eli_Fisker/EEE/Eterna_dictionary|Eli's EteRNA Dictionary]]</li> | |||
<li>[[End Loops]]</li> | <li>[[End Loops]]</li> | ||
<li>[[Energy]]</li> | <li>[[Energy]]</li> | ||
<li>[[Ensemble Defect]]</li> | <li>[[Ensemble Defect]]</li> | ||
<li>[[Ensemble Diversity]]</li> | <li>[[Ensemble Diversity]]</li> | ||
<li>[[Enzyme]]</li> | |||
<li>[[ePCR]]</li> | |||
<li>[[Epigenetics]]</li> | |||
<li>[[EteRNA]]</li> | <li>[[EteRNA]]</li> | ||
<li>[[EteRNA Bot]]</li> | <li>[[EteRNA Bot]]</li> | ||
<li>[[EteRNA Ensemble Algorithm]]</li> | <li>[[EteRNA Ensemble Algorithm]]</li> | ||
<li>[[External Loop]]</li> | <li>[[External Loop]]</li> | ||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
Line 156: | Line 167: | ||
<ul> | <ul> | ||
<li>[[Flavin Mononucleotide]] ([[FMN]])</li> | <li>[[Flavin Mononucleotide]] ([[FMN]])</li> | ||
<li>[[Flips]]</li> | |||
<li>[[Fluorine]]</li> | |||
<li>[[Folding]]</li> | <li>[[Folding]]</li> | ||
<li>[[Free Energy]]</li> | <li>[[Free Energy]]</li> | ||
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<ul> | <ul> | ||
<li>[[GC Pair]]</li> | <li>[[GC Pair]]</li> | ||
<li>[[Gel Electrophoresis]]</li> | <li>[[Gel Electrophoresis]] </li> | ||
<li>[[Gene]]</li> | |||
<li>[[Gibbs Free Energy]]</li> | |||
<li>[[Green Fluorescent Protein]]</li> | |||
<li>[[GU Pair]]</li> | <li>[[GU Pair]]</li> | ||
<li>[[Guanine]]</li> | <li>[[Guanine]]</li> | ||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
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<li>[[Hook]]</li> | <li>[[Hook]]</li> | ||
<li>[[Hotkeys]]</li> | <li>[[Hotkeys]]</li> | ||
<li>[[Hydrogen]]</li> | |||
<li>[[Hydrogen bond]]</li> | <li>[[Hydrogen bond]]</li> | ||
</ul> | </ul> | ||
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<li>[[Inosine]]</li> | <li>[[Inosine]]</li> | ||
<li>[[Internal Loop]]</li> | <li>[[Internal Loop]]</li> | ||
<li>[[Intron]]</li> | |||
<li>[[Isomer]]</li> | |||
<li>[[IUPAC notation]]</li> | <li>[[IUPAC notation]]</li> | ||
<li>[[Isolated base Pair]]</li> | |||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
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<li>[[Kcal]]</li> | <li>[[Kcal]]</li> | ||
<li>[[Kink Turn]] ([[K-Turn]])</li> | <li>[[Kink Turn]] ([[K-Turn]])</li> | ||
<li>[[Kissing Loop]]</li> | |||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
<h2>L</h2> | <h2>L</h2> | ||
<ul> | <ul> | ||
<li>[[Lab]]</li> | <li>[[Lab]] </li> | ||
<li>[[Legacy scaling]]</li> | |||
<li>[[Ligand]]</li> | <li>[[Ligand]]</li> | ||
<li>[[LinkBot]]</li> | <li>[[LinkBot]]</li> | ||
<li>[[Loop]]</li> | <li>[[Loop]]</li> | ||
<li>[[Low Performance Mode]]</li> | <li>[[Low Performance Mode]]</li> | ||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
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<li>[[Melting temperature]]</li> | <li>[[Melting temperature]]</li> | ||
<li>[[Messenger RNA]]</li> | <li>[[Messenger RNA]]</li> | ||
<li>[[microRNA]] ([[miRNA]])</li> | |||
<li>[[Minimum Free Energy Structure]] (a.k.a. [[MFE Structure]])</li> | <li>[[Minimum Free Energy Structure]] (a.k.a. [[MFE Structure]])</li> | ||
<li>[[Misfold]]</li> | <li>[[Misfold]]</li> | ||
<li>[[Mismatch]]</li> | <li>[[Mismatch]]</li> | ||
<li>[[Mole]]</li> | |||
<li>[[Molecule]]</li> | <li>[[Molecule]]</li> | ||
<li>[[Molecular Replacement]]</li> | <li>[[Molecular Replacement]]</li> | ||
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<li>[[Monthly Eterna Meeting]]</li> | <li>[[Monthly Eterna Meeting]]</li> | ||
<li>[[mRNA]]</li> | <li>[[mRNA]]</li> | ||
<li>[[MS2]]</li> | |||
<li>[[Multiloop]]</li> | <li>[[Multiloop]]</li> | ||
<li>[[Mutation]]</li> | |||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
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<ul> | <ul> | ||
<li>[[Natural Mode]]</li> | <li>[[Natural Mode]]</li> | ||
<li>[[Nested]]</li> | <li>[[Nested]] </li> | ||
<li>[[Next Generation Sequencing]]</li> | |||
<li>[[Nitrogen]]</li> | |||
<li>[[NMR]]</li> | <li>[[NMR]]</li> | ||
<li>[[Noncanonical base pair]]</li> | <li>[[Noncanonical base pair]]</li> | ||
Line 237: | Line 263: | ||
<li>[[Nucleobase]]</li> | <li>[[Nucleobase]]</li> | ||
<li>[[Nucleotide]]</li> | <li>[[Nucleotide]]</li> | ||
<li>[[ | <li>[[Nupack]]</li> | ||
<li>[[ | </ul> | ||
<p> </p> | |||
<h2>O</h2> | |||
<ul> | |||
<li>[[Oxygen]]</li> | |||
<li>[[Oligo]]</li> | |||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
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<li>[[Pairing Probabilities Plot]]</li> | <li>[[Pairing Probabilities Plot]]</li> | ||
<li>[[Pentaloop]]</li> | <li>[[Pentaloop]]</li> | ||
<li>[[Paper Lab]]</li> | |||
<li>[[Phosphate]]</li> | <li>[[Phosphate]]</li> | ||
<li>[[Phosphorus]]</li> | |||
<li>[[Pilot Project]]</li> | |||
<li>[[Player Projects]]</li> | <li>[[Player Projects]]</li> | ||
<li>[[Polymerase]]</li> | <li>[[Polymerase]]</li> | ||
Line 274: | Line 308: | ||
<li>[[Riboswitch]]</li> | <li>[[Riboswitch]]</li> | ||
<li>[[Ribozyme]]</li> | <li>[[Ribozyme]]</li> | ||
<li>[[RMDB]]</li> | |||
<li>[[RNA]]</li> | <li>[[RNA]]</li> | ||
<li>[[RNA World Hypothesis]]</li> | <li>[[RNA World Hypothesis]]</li> | ||
Line 285: | Line 320: | ||
<li>[[Sheared G.A]]</li> | <li>[[Sheared G.A]]</li> | ||
<li>[[Shiftable puzzle]]</li> | <li>[[Shiftable puzzle]]</li> | ||
<li>[[Signal-to-noise-ratio]]</li> | |||
<li>[[siRNA]]</li> | |||
<li>[[Slot]]</li> | |||
<li>[[Splicing]]</li> | <li>[[Splicing]]</li> | ||
<li>[[Stack]]</li> | <li>[[Stack]]</li> | ||
<li>[[Stacking]]</li> | <li>[[Stacking]]</li> | ||
<li>[[Stem]]</li> | |||
<li>[[Suboptimal Structure]]</li> | <li>[[Suboptimal Structure]]</li> | ||
<li>[[Sugar]]</li> | <li>[[Sugar]]</li> | ||
<li>[[Sulfur]]</li> | |||
<li>[[Switch]]</li> | <li>[[Switch]]</li> | ||
<li>[[Switch Puzzle]]</li> | |||
<li>[[Switching area]]</li> | <li>[[Switching area]]</li> | ||
<li>[[Synthesis]]</li> | |||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
<h2>T</h2> | <h2>T</h2> | ||
<ul> | <ul> | ||
<li>[[ | <li>[[Target Mode]]</li> | ||
<li>[[Terminal Mismatch]]</li> | <li>[[Terminal Mismatch]]</li> | ||
<li>[[Tetraloop]]</li> | <li>[[Tetraloop]]</li> | ||
Line 313: | Line 355: | ||
<ul> | <ul> | ||
<li>[[Vienna]]</li> | <li>[[Vienna]]</li> | ||
<li>[[Virus]]</li> | |||
</ul> | </ul> | ||
<p> </p> | <p> </p> | ||
<h2>W</h2> | <h2>W</h2> | ||
<h2>X</h2> | <h2>X</h2> | ||
<ul> | |||
<li>[[X-ray Chrystallography]]</li> | |||
</ul> | |||
<h2>Y</h2> | <h2>Y</h2> | ||
<h2>Z</h2> | <h2>Z</h2> | ||
<ul> | <ul> | ||
<li>[[Zigzag]]</li> | <li>[[Zigzag]]</li> | ||
</ul> | |||
<h2>0-9</h2> | |||
<ul> | |||
<li>[[1M7]]</li> | |||
<li>[[3']]</li> | |||
<li>[[5']]</li> | |||
</ul> | </ul> |
Revision as of 21:20, 30 May 2017
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Contents |
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A
- Absolute Scaling
- Adenine
- Adjacent pairs
- Algorithm Wars
- Aligned Pair
- Alternative Structure
- Amino acid
- Antiparallel DNA
- Aptamer
- Arm
- Asymmetric multiloop
- Atom
- ATP
- AU Pair
B
- Backbone
- Bacteria
- Barcode
- Base
- Base Pair
- Base Pair Flipping
- Base Pair Orientation
- Base Triple
- Base triplets
- Blocking
- Blocking point
- Boost points
- Boosting
- Bound target
- Bp
- Bulge
C
- Canonical bond
- Capillary Electrophoresis
- Carbon
- Catalyst Points
- Chemical Reagent
- Christmas Tree
- Closing Pair
- Cloud Lab
- Coaxial Stacking
- Complementarity
- Complementary DNA (cDNA)
- Concentration
- Constraints
- Cub Scout
- Cytosine
D
- Dangling ends
- Das lab
- Deoxyribose
- Dev Chat
- Diazine
- Dictionary Chat Bot
- Dinucleotide
- Directionality
- DMS
- DNA
- DNA sequencing
- Dot-Bracket Notation (a.k.a. Dot-Parentheses Notation)
- Dot Plot
- Double Sameturning Pair
E
- Electron
- Elements
- Eli's Encyclopædia EteRNA
- Eli's EteRNA Dictionary
- End Loops
- Energy
- Ensemble Defect
- Ensemble Diversity
- Enzyme
- ePCR
- Epigenetics
- EteRNA
- EteRNA Bot
- EteRNA Ensemble Algorithm
- External Loop
F
G
H
- Hairpin Loop
- Hammerhead Ribozyme
- Hard-Boiling
- Helix
- Hidden Instabilities
- Hook
- Hotkeys
- Hydrogen
- Hydrogen bond
I
- Illumina Sequencing
- Illusion
- Independent Stability
- Inosine
- Internal Loop
- Intron
- Isomer
- IUPAC notation
- Isolated base Pair
J
K
L
M
- Melt Plot
- Melting temperature
- Messenger RNA
- microRNA (miRNA)
- Minimum Free Energy Structure (a.k.a. MFE Structure)
- Misfold
- Mismatch
- Mole
- Molecule
- Molecular Replacement
- Molecule, switch
- Monthly Eterna Meeting
- mRNA
- MS2
- Multiloop
- Mutation
N
- Natural Mode
- Nested
- Next Generation Sequencing
- Nitrogen
- NMR
- Noncanonical base pair
- Nucleic Acid
- Nucleobase
- Nucleotide
- Nupack
O
P
- Pairing Probabilities Plot
- Pentaloop
- Paper Lab
- Phosphate
- Phosphorus
- Pilot Project
- Player Projects
- Polymerase
- Polymerase Chain Reaction (PCR)
- Probe
- Protein
- Pseudoknot
- Purine
- Puzzle
- Puzzle Designer
- Puzzle Maker
- Pyrimidine
Q
R
S
- Sanger Sequencing
- Script Documentation
- SHAPE
- Sheared G.A
- Shiftable puzzle
- Signal-to-noise-ratio
- siRNA
- Slot
- Splicing
- Stack
- Stacking
- Stem
- Suboptimal Structure
- Sugar
- Sulfur
- Switch
- Switch Puzzle
- Switching area
- Synthesis
T
U
V